Optical Nanosensor Architecture for Cell-Signaling Molecules Using DNA Aptamer-Coated Carbon Nanotubes

Tae-Gon Cha, Birck Nanotechnology Center, Purdue University
Benjamin A. Baker, Birck Nanotechnology Center, Purdue University
M. Dane Sauffer, Birck Nanotechnology Center, Purdue University
Janette Salgado, Birck Nanotechnology Center, Purdue University
David Jaroch, Birck Nanotechnology Center, Bindley Bioscience Center, Purdue University
Jenna Rickus, Birck Nanotechnology Center, Purdue University
D. Marshall Porterfield, Birck Nanotechnology Center, Purdue University
Jong Hyun Choi, Birck Nanotechnology Center, Purdue University

Date of this Version

5-2011

Citation

ACS Nano, 2011, 5 (5), pp 4236–4244

Abstract

We report a novel optical biosensor platform using near-infrared fluorescent single-walled carbon nanotubes (SWNTs) functionalized with target-recognizing aptamer DNA for noninvasively detecting cell-signaling molecules In real time. Photoluminescence (PL) emission of aptamer-coated SWNTs is modulated upon selectively binding to target molecules, which is exploited to detect insulin using an insulin-binding aptamer (IBA) as a molecular recognition element. We find that nanotube PL quenches upon insulin recognition via a photoinduced charge transfer mechanism with a quenching rate of k(q) = 5.85 x 10(14) M(-1) s(-1) a diffusion reaction rate of k(r) = 0.129 s(-1). Circular dichroism spectra reveal for the first time that IBA strands retain a four-stranded, parallel guanine quadruplex conformation on the nanotubes, ensuring target selectivity. We demonstrate that these IBA-functionalized SWNT sensors incorporated in a collagen extracellular matrix (ECM) can be regenerated by removing bound analytes through enzymatic proteolysis. As proof-of-concept, we show that the SWNT sensors embedded in the ECM promptly detect insulin secreted by cultured pancreatic INS-1 cells stimulated by glucose influx and report a gradient contour of insulin secretion profile. This novel design enables new types of label-free assays and noninvasive, in situ, real-time detection schemes for cell-signaling molecules.

Discipline(s)

Nanoscience and Nanotechnology

 

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